Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDX4O14627 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDX4O14627 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 AC125634.1-201ENST00000438758 1403 ntBASIC17.72■□□□□ 0.43
CDX4O14627 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 PKD1P6-201ENST00000343738 4769 ntBASIC17.72■□□□□ 0.43
CDX4O14627 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 FP475955.4-201ENST00000623131 1990 ntBASIC17.72■□□□□ 0.43
CDX4O14627 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.72■□□□□ 0.43
CDX4O14627 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.72■□□□□ 0.43
CDX4O14627 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.72■□□□□ 0.43
CDX4O14627 AC007967.2-201ENST00000432613 625 ntBASIC17.72■□□□□ 0.43
CDX4O14627 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.72■□□□□ 0.43
CDX4O14627 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.72■□□□□ 0.43
CDX4O14627 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 KRT18P41-201ENST00000518924 1277 ntBASIC17.72■□□□□ 0.43
CDX4O14627 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 AC105339.3-201ENST00000560043 636 ntBASIC17.72■□□□□ 0.43
CDX4O14627 AC002347.1-201ENST00000569543 541 ntBASIC17.72■□□□□ 0.43
CDX4O14627 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.72■□□□□ 0.43
CDX4O14627 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDX4O14627 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
CDX4O14627 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.71■□□□□ 0.43
CDX4O14627 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CDX4O14627 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 MTCL1P1-201ENST00000446207 792 ntBASIC17.71■□□□□ 0.43
CDX4O14627 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 AC008687.5-201ENST00000593746 558 ntBASIC17.71■□□□□ 0.43
CDX4O14627 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.71■□□□□ 0.43
CDX4O14627 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.71■□□□□ 0.43
CDX4O14627 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.71■□□□□ 0.43
CDX4O14627 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDX4O14627 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.71■□□□□ 0.43
CDX4O14627 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.71■□□□□ 0.43
CDX4O14627 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.71■□□□□ 0.42
CDX4O14627 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
CDX4O14627 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.7■□□□□ 0.42
CDX4O14627 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 AP002414.3-201ENST00000589352 1468 ntBASIC17.7■□□□□ 0.42
CDX4O14627 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.7■□□□□ 0.42
CDX4O14627 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDX4O14627 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.7■□□□□ 0.42
CDX4O14627 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 AC023274.1-201ENST00000418278 595 ntBASIC17.7■□□□□ 0.42
CDX4O14627 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.7■□□□□ 0.42
CDX4O14627 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.7■□□□□ 0.42
CDX4O14627 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
CDX4O14627 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.7■□□□□ 0.42
CDX4O14627 MIR3197-201ENST00000582241 73 ntBASIC17.7■□□□□ 0.42
CDX4O14627 MTDHP5-201ENST00000598980 586 ntBASIC17.7■□□□□ 0.42
CDX4O14627 AL139288.1-201ENST00000623748 933 ntBASIC17.7■□□□□ 0.42
CDX4O14627 AC107918.4-202ENST00000641623 219 ntBASIC17.7■□□□□ 0.42
CDX4O14627 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDX4O14627 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDX4O14627 KRT18P28-201ENST00000453838 1332 ntBASIC17.7■□□□□ 0.42
CDX4O14627 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.7■□□□□ 0.42
CDX4O14627 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDX4O14627 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.69■□□□□ 0.42
CDX4O14627 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms