Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM1O00151 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM1O00151 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM1O00151 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 AC012317.2-201ENST00000623305 2251 ntBASIC17.59■□□□□ 0.41
PDLIM1O00151 AD000864.1-201ENST00000624076 2295 ntBASIC17.59■□□□□ 0.41
PDLIM1O00151 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM1O00151 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.58■□□□□ 0.41
PDLIM1O00151 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.58■□□□□ 0.41
PDLIM1O00151 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM1O00151 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM1O00151 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.58■□□□□ 0.41
PDLIM1O00151 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM1O00151 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM1O00151 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PDLIM1O00151 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PDLIM1O00151 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.58■□□□□ 0.41
PDLIM1O00151 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDLIM1O00151 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM1O00151 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 AC128676.1-201ENST00000454392 318 ntBASIC17.58■□□□□ 0.4
PDLIM1O00151 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM1O00151 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDLIM1O00151 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.58■□□□□ 0.4
PDLIM1O00151 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PDLIM1O00151 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 AL499627.1-201ENST00000569373 2188 ntBASIC17.57■□□□□ 0.4
PDLIM1O00151 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 KRT8P8-201ENST00000434750 1448 ntBASIC17.57■□□□□ 0.4
PDLIM1O00151 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM1O00151 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 TMEM191A-211ENST00000637163 1067 ntBASIC17.57■□□□□ 0.4
PDLIM1O00151 AC073648.6-201ENST00000641589 218 ntBASIC17.57■□□□□ 0.4
PDLIM1O00151 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
PDLIM1O00151 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM1O00151 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.57■□□□□ 0.4
PDLIM1O00151 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.57■□□□□ 0.4
PDLIM1O00151 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 AC080080.1-201ENST00000625121 2420 ntBASIC17.57■□□□□ 0.4
PDLIM1O00151 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDLIM1O00151 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM1O00151 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM1O00151 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 PRORSD1P-201ENST00000295112 541 ntBASIC17.56■□□□□ 0.4
PDLIM1O00151 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.56■□□□□ 0.4
PDLIM1O00151 KRT17P3-201ENST00000420566 1262 ntBASIC17.56■□□□□ 0.4
PDLIM1O00151 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDLIM1O00151 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
PDLIM1O00151 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PDLIM1O00151 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDLIM1O00151 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDLIM1O00151 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDLIM1O00151 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms