Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 AC008622.2-201ENST00000617006 1229 ntBASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPSF4LA6NMK7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 AL135905.2-201ENST00000584934 1404 ntBASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 MYLKP1-201ENST00000509077 1580 ntBASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPSF4LA6NMK7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 AL109659.2-201ENST00000606809 1674 ntBASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 PRORSD1P-201ENST00000295112 541 ntBASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 AC142381.4-202ENST00000563973 229 ntBASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPSF4LA6NMK7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPSF4LA6NMK7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms