Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.97■□□□□ 0.79
CCDC66A2RUB6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC66A2RUB6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 AL160286.2-201ENST00000567150 934 ntBASIC19.96■□□□□ 0.79
CCDC66A2RUB6 C1QL1P1-201ENST00000568105 661 ntBASIC19.96■□□□□ 0.79
CCDC66A2RUB6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.96■□□□□ 0.79
CCDC66A2RUB6 NBPF21P-201ENST00000425093 1451 ntBASIC19.96■□□□□ 0.79
CCDC66A2RUB6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC66A2RUB6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
CCDC66A2RUB6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.95■□□□□ 0.78
CCDC66A2RUB6 UNC93B5-201ENST00000530315 699 ntBASIC19.95■□□□□ 0.78
CCDC66A2RUB6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms