Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HFM1A2PYH4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HFM1A2PYH4 TPM4P1-201ENST00000436100 807 ntBASIC27.19■■□□□ 1.94
HFM1A2PYH4 TOB2P1-201ENST00000469761 992 ntBASIC27.19■■□□□ 1.94
HFM1A2PYH4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC27.19■■□□□ 1.94
HFM1A2PYH4 AC012313.10-201ENST00000623509 926 ntBASIC27.19■■□□□ 1.94
HFM1A2PYH4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC27.19■■□□□ 1.94
HFM1A2PYH4 KRT18P1-202ENST00000452408 1331 ntBASIC27.19■■□□□ 1.94
HFM1A2PYH4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
HFM1A2PYH4 AC132938.6-201ENST00000623828 1655 ntBASIC27.19■■□□□ 1.94
HFM1A2PYH4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC27.19■■□□□ 1.94
HFM1A2PYH4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC27.19■■□□□ 1.94
HFM1A2PYH4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC27.18■■□□□ 1.94
HFM1A2PYH4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 AC091607.1-201ENST00000490318 1060 ntBASIC27.18■■□□□ 1.94
HFM1A2PYH4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC27.18■■□□□ 1.94
HFM1A2PYH4 AC092329.2-201ENST00000598402 547 ntBASIC27.18■■□□□ 1.94
HFM1A2PYH4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC27.18■■□□□ 1.94
HFM1A2PYH4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC27.18■■□□□ 1.94
HFM1A2PYH4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC27.18■■□□□ 1.94
HFM1A2PYH4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
HFM1A2PYH4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC27.18■■□□□ 1.94
HFM1A2PYH4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 AC246785.2-201ENST00000432512 513 ntBASIC27.17■■□□□ 1.94
HFM1A2PYH4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 AC233702.3-201ENST00000578656 1387 ntBASIC27.17■■□□□ 1.94
HFM1A2PYH4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
HFM1A2PYH4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC27.17■■□□□ 1.94
HFM1A2PYH4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
HFM1A2PYH4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.16■■□□□ 1.94
HFM1A2PYH4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
HFM1A2PYH4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 ANKRD20A8P-203ENST00000641373 517 ntBASIC27.16■■□□□ 1.94
HFM1A2PYH4 GMCL1P1-201ENST00000463439 1581 ntBASIC27.16■■□□□ 1.94
HFM1A2PYH4 AC093010.1-201ENST00000473625 1624 ntBASIC27.16■■□□□ 1.94
HFM1A2PYH4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HFM1A2PYH4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HFM1A2PYH4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
HFM1A2PYH4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
HFM1A2PYH4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 AC012615.1-201ENST00000565797 1299 ntBASIC27.16■■□□□ 1.94
HFM1A2PYH4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC27.16■■□□□ 1.94
HFM1A2PYH4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
HFM1A2PYH4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
HFM1A2PYH4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms