Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 LINC01568-207ENST00000641790 1380 ntBASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC009947.2-201ENST00000444014 672 ntBASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC112497.1-201ENST00000624824 639 ntBASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KRT8P7-201ENST00000533003 1432 ntBASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.28■□□□□ 0.2
IGKV1D-43A0A0B4J1Z2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms