Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 MMP23A-201ENST00000234610 1017 ntBASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 CKBP1-201ENST00000565489 1086 ntBASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 AC093503.3-201ENST00000624917 2352 ntBASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAV26-1A0A087WT03 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AC096733.2-201ENST00000609937 1394 ntBASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 FITM1-202ENST00000559294 800 ntBASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AP005242.2-201ENST00000580065 1175 ntBASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AC073912.3-201ENST00000624414 853 ntBASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms