Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 SPCS2P1-201ENST00000561636 679 ntBASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 MTDHP5-201ENST00000598980 586 ntBASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
ARFGEF1Q9Y6D6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 Z82202.1-201ENST00000623446 1880 ntBASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 AP002414.3-201ENST00000589352 1468 ntBASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 MTDHP4-201ENST00000600287 670 ntBASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARFGEF1Q9Y6D6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 AL356309.3-201ENST00000624132 1934 ntBASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 AC002310.6-201ENST00000624451 1377 ntBASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 KRT18P41-201ENST00000518924 1277 ntBASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 Z98044.1-201ENST00000632503 1764 ntBASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARFGEF1Q9Y6D6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 AC011467.2-201ENST00000598425 242 ntBASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 AC107918.4-202ENST00000641623 219 ntBASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 AC112907.3-201ENST00000577781 2400 ntBASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ARFGEF1Q9Y6D6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 YBX1P5-201ENST00000509441 847 ntBASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.47■■□□□ 1.19
ARFGEF1Q9Y6D6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms