Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCDHGA9Q9Y5G4 AL391807.1-203ENST00000604392 2365 ntBASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 AL138781.2-201ENST00000617896 1843 ntBASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 TSPY22P-201ENST00000427496 604 ntBASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 DRAXINP1-201ENST00000437611 948 ntBASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHGA9Q9Y5G4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 KRT18P1-202ENST00000452408 1331 ntBASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 UNC93B7-201ENST00000509439 705 ntBASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 AL032819.2-201ENST00000624543 2162 ntBASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA9Q9Y5G4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 TSPY19P-201ENST00000418461 509 ntBASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 TSPY18P-201ENST00000441642 509 ntBASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 IFNL4P1-201ENST00000607083 540 ntBASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 AL121772.3-201ENST00000610840 674 ntBASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA9Q9Y5G4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA9Q9Y5G4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms