Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB9Q9Y5E1 AL031598.1-201ENST00000561511 1773 ntBASIC18.76■□□□□ 0.59
PCDHB9Q9Y5E1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 AC004408.2-201ENST00000623613 2777 ntBASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 AC024243.1-201ENST00000609234 778 ntBASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHB9Q9Y5E1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 AL499627.1-201ENST00000569373 2188 ntBASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 ATP5G2P1-201ENST00000433580 426 ntBASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 PRELID1P1-202ENST00000567272 903 ntBASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 HOXB1-202ENST00000577092 1414 ntBASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB9Q9Y5E1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 GCSHP2-201ENST00000560971 527 ntBASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 MIR3652-201ENST00000579335 131 ntBASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 KRT8P7-201ENST00000533003 1432 ntBASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PCDHB9Q9Y5E1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB9Q9Y5E1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms