Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 AC107956.1-201ENST00000494359 873 ntBASIC21.68■■□□□ 1.06
KIF3AQ9Y496 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
KIF3AQ9Y496 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 MCCD1P1-208ENST00000445732 328 ntBASIC21.67■■□□□ 1.06
KIF3AQ9Y496 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
KIF3AQ9Y496 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 MYLKP1-201ENST00000509077 1580 ntBASIC21.66■■□□□ 1.06
KIF3AQ9Y496 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 ABHD17AP1-201ENST00000358206 933 ntBASIC21.66■■□□□ 1.06
KIF3AQ9Y496 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 GCSHP5-201ENST00000443090 522 ntBASIC21.66■■□□□ 1.06
KIF3AQ9Y496 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.66■■□□□ 1.06
KIF3AQ9Y496 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.66■■□□□ 1.06
KIF3AQ9Y496 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 AC008556.1-201ENST00000610908 2040 ntBASIC21.65■■□□□ 1.06
KIF3AQ9Y496 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 AL158047.1-201ENST00000445918 881 ntBASIC21.65■■□□□ 1.06
KIF3AQ9Y496 AC097488.1-201ENST00000507834 756 ntBASIC21.65■■□□□ 1.06
KIF3AQ9Y496 AC233702.5-201ENST00000584107 538 ntBASIC21.65■■□□□ 1.06
KIF3AQ9Y496 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.65■■□□□ 1.06
KIF3AQ9Y496 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
KIF3AQ9Y496 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KIF3AQ9Y496 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.64■■□□□ 1.05
KIF3AQ9Y496 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms