Protein–RNA interactions for Protein: Q9Y324

FCF1, rRNA-processing protein FCF1 homolog, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1Q9Y324 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 PVRIG2P-201ENST00000435460 978 ntBASIC18.71■□□□□ 0.59
FCF1Q9Y324 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
FCF1Q9Y324 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FCF1Q9Y324 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.71■□□□□ 0.59
FCF1Q9Y324 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
FCF1Q9Y324 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.71■□□□□ 0.58
FCF1Q9Y324 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 AC009065.1-201ENST00000564055 1225 ntBASIC18.7■□□□□ 0.58
FCF1Q9Y324 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FCF1Q9Y324 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 AC004408.2-201ENST00000623613 2777 ntBASIC18.7■□□□□ 0.58
FCF1Q9Y324 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
FCF1Q9Y324 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 IER3-202ENST00000376377 1350 ntBASIC18.69■□□□□ 0.58
FCF1Q9Y324 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 AL645929.1-201ENST00000420084 975 ntBASIC18.69■□□□□ 0.58
FCF1Q9Y324 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.69■□□□□ 0.58
FCF1Q9Y324 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
FCF1Q9Y324 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FCF1Q9Y324 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 MIR149-201ENST00000384879 89 ntBASIC18.68■□□□□ 0.58
FCF1Q9Y324 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FCF1Q9Y324 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.68■□□□□ 0.58
FCF1Q9Y324 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms