Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 AC004408.2-201ENST00000623613 2777 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 WWOX-216ENST00000569818 525 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 AC011558.1-201ENST00000623459 338 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 AC093503.3-201ENST00000624917 2352 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 CROCCP3-202ENST00000420820 1947 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 AC106820.2-201ENST00000563775 3264 ntBASIC16.94■□□□□ 0.3
RPH3AQ9Y2J0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 AC083906.6-201ENST00000641366 219 ntBASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.93■□□□□ 0.3
RPH3AQ9Y2J0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AP000523.1-201ENST00000398242 1049 ntBASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AL441883.1-201ENST00000566170 1045 ntBASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 AC024243.1-201ENST00000609234 778 ntBASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RPH3AQ9Y2J0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 AC093525.10-201ENST00000625130 1569 ntBASIC16.91■□□□□ 0.3
RPH3AQ9Y2J0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms