Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 MIR564-202ENST00000385049 94 ntBASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 AP002383.4-201ENST00000442518 975 ntBASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSX2IPQ9Y2D8 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 TEX21P-204ENST00000641479 1693 ntBASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 KRT18P1-202ENST00000452408 1331 ntBASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 AC004870.1-201ENST00000315132 882 ntBASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 AC008556.1-201ENST00000610908 2040 ntBASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 AC116562.4-201ENST00000641316 2276 ntBASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SSX2IPQ9Y2D8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
SSX2IPQ9Y2D8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 AC034236.2-201ENST00000606662 1610 ntBASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.83■□□□□ 0.76
SSX2IPQ9Y2D8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 FAAHP1-202ENST00000446499 1238 ntBASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.82■□□□□ 0.76
SSX2IPQ9Y2D8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms