Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.55■□□□□ 0.88
GNEQ9Y223 AC113404.2-201ENST00000507884 177 ntBASIC20.55■□□□□ 0.88
GNEQ9Y223 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.55■□□□□ 0.88
GNEQ9Y223 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
GNEQ9Y223 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.55■□□□□ 0.88
GNEQ9Y223 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
GNEQ9Y223 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GNEQ9Y223 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.55■□□□□ 0.88
GNEQ9Y223 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.54■□□□□ 0.88
GNEQ9Y223 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.54■□□□□ 0.88
GNEQ9Y223 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.54■□□□□ 0.88
GNEQ9Y223 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GNEQ9Y223 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.54■□□□□ 0.88
GNEQ9Y223 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 MIR149-201ENST00000384879 89 ntBASIC20.54■□□□□ 0.88
GNEQ9Y223 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
GNEQ9Y223 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
GNEQ9Y223 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.54■□□□□ 0.88
GNEQ9Y223 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.54■□□□□ 0.88
GNEQ9Y223 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.54■□□□□ 0.88
GNEQ9Y223 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.54■□□□□ 0.88
GNEQ9Y223 AC120114.3-201ENST00000611923 658 ntBASIC20.54■□□□□ 0.88
GNEQ9Y223 AC006538.3-201ENST00000612495 578 ntBASIC20.54■□□□□ 0.88
GNEQ9Y223 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
GNEQ9Y223 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.54■□□□□ 0.88
GNEQ9Y223 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GNEQ9Y223 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GNEQ9Y223 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.53■□□□□ 0.88
GNEQ9Y223 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
GNEQ9Y223 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.53■□□□□ 0.88
GNEQ9Y223 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.53■□□□□ 0.88
GNEQ9Y223 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 AL590627.1-203ENST00000421194 1026 ntBASIC20.53■□□□□ 0.88
GNEQ9Y223 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.53■□□□□ 0.88
GNEQ9Y223 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.53■□□□□ 0.88
GNEQ9Y223 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.53■□□□□ 0.88
GNEQ9Y223 AC064862.7-201ENST00000604520 867 ntBASIC20.53■□□□□ 0.88
GNEQ9Y223 AL591684.3-201ENST00000605187 298 ntBASIC20.53■□□□□ 0.88
GNEQ9Y223 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.53■□□□□ 0.88
GNEQ9Y223 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GNEQ9Y223 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.53■□□□□ 0.88
GNEQ9Y223 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.53■□□□□ 0.88
GNEQ9Y223 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GNEQ9Y223 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
GNEQ9Y223 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GNEQ9Y223 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.52■□□□□ 0.88
GNEQ9Y223 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GNEQ9Y223 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
GNEQ9Y223 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.52■□□□□ 0.88
GNEQ9Y223 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.52■□□□□ 0.88
GNEQ9Y223 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.52■□□□□ 0.88
GNEQ9Y223 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
GNEQ9Y223 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.52■□□□□ 0.88
GNEQ9Y223 GPALPP1-207ENST00000611650 899 ntBASIC20.52■□□□□ 0.88
GNEQ9Y223 AC114341.1-201ENST00000618070 349 ntBASIC20.52■□□□□ 0.88
GNEQ9Y223 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.52■□□□□ 0.88
GNEQ9Y223 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GNEQ9Y223 AC007952.6-201ENST00000573168 2673 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms