Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF216Q9NWF9 TSPY14P-201ENST00000303979 915 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
RNF216Q9NWF9 NPM1P10-201ENST00000398310 865 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 AC004980.1-204ENST00000429707 299 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC21.31■■□□□ 1
RNF216Q9NWF9 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC21.31■■□□□ 1
RNF216Q9NWF9 ATP5G1P1-201ENST00000448724 379 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC21.31■■□□□ 1
RNF216Q9NWF9 KRT18P35-201ENST00000510488 1269 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.31■■□□□ 1
RNF216Q9NWF9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.31■■□□□ 1
RNF216Q9NWF9 AL049536.1-201ENST00000625043 744 ntBASIC21.31■■□□□ 1
RNF216Q9NWF9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF216Q9NWF9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.31■■□□□ 1
RNF216Q9NWF9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF216Q9NWF9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.3■■□□□ 1
RNF216Q9NWF9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RNF216Q9NWF9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RNF216Q9NWF9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
RNF216Q9NWF9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.3■■□□□ 1
RNF216Q9NWF9 AL050305.1-201ENST00000399993 1230 ntBASIC21.3■■□□□ 1
RNF216Q9NWF9 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RNF216Q9NWF9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.3■■□□□ 1
RNF216Q9NWF9 AC010086.1-201ENST00000437359 1052 ntBASIC21.3■■□□□ 1
RNF216Q9NWF9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC21.3■■□□□ 1
RNF216Q9NWF9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC21.3■■□□□ 1
RNF216Q9NWF9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.3■■□□□ 1
RNF216Q9NWF9 AC097488.1-201ENST00000507834 756 ntBASIC21.3■■□□□ 1
RNF216Q9NWF9 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC21.3■■□□□ 1
RNF216Q9NWF9 LINC01198-206ENST00000595532 1125 ntBASIC21.3■■□□□ 1
RNF216Q9NWF9 AC005785.2-201ENST00000624655 631 ntBASIC21.3■■□□□ 1
RNF216Q9NWF9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RNF216Q9NWF9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RNF216Q9NWF9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF216Q9NWF9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 AL359641.1-201ENST00000412509 1558 ntBASIC21.29■■□□□ 1
RNF216Q9NWF9 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC21.29■■□□□ 1
RNF216Q9NWF9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 MESTP1-201ENST00000404287 994 ntBASIC21.29■■□□□ 1
RNF216Q9NWF9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.29■■□□□ 1
RNF216Q9NWF9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC21.29■■□□□ 1
RNF216Q9NWF9 MTND1P36-201ENST00000522384 936 ntBASIC21.29■■□□□ 1
RNF216Q9NWF9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.29■■□□□ 1
RNF216Q9NWF9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.29■■□□□ 1
RNF216Q9NWF9 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC21.29■■□□□ 1
RNF216Q9NWF9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.29■■□□□ 1
RNF216Q9NWF9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 AC090116.1-201ENST00000615679 446 ntBASIC21.29■■□□□ 1
RNF216Q9NWF9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RNF216Q9NWF9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.29■■□□□ 1
RNF216Q9NWF9 WDYHV1-201ENST00000287387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF216Q9NWF9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.28■■□□□ 1
RNF216Q9NWF9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RNF216Q9NWF9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.28■■□□□ 1
RNF216Q9NWF9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.28■■□□□ 1
RNF216Q9NWF9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.28■■□□□ 1
RNF216Q9NWF9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 AF228730.1-201ENST00000397972 663 ntBASIC21.28■■□□□ 1
RNF216Q9NWF9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF216Q9NWF9 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms