Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
POLR3BQ9NW08 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
POLR3BQ9NW08 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19■□□□□ 0.63
POLR3BQ9NW08 HLA-F-220ENST00000434407 884 ntBASIC19■□□□□ 0.63
POLR3BQ9NW08 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19■□□□□ 0.63
POLR3BQ9NW08 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19■□□□□ 0.63
POLR3BQ9NW08 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19■□□□□ 0.63
POLR3BQ9NW08 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19■□□□□ 0.63
POLR3BQ9NW08 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19■□□□□ 0.63
POLR3BQ9NW08 IFNL4P1-201ENST00000607083 540 ntBASIC19■□□□□ 0.63
POLR3BQ9NW08 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19■□□□□ 0.63
POLR3BQ9NW08 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19■□□□□ 0.63
POLR3BQ9NW08 AL391807.1-203ENST00000604392 2365 ntBASIC19■□□□□ 0.63
POLR3BQ9NW08 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3BQ9NW08 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19■□□□□ 0.63
POLR3BQ9NW08 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3BQ9NW08 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3BQ9NW08 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR3BQ9NW08 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
POLR3BQ9NW08 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19■□□□□ 0.63
POLR3BQ9NW08 KRT18P1-202ENST00000452408 1331 ntBASIC19■□□□□ 0.63
POLR3BQ9NW08 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19■□□□□ 0.63
POLR3BQ9NW08 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 KRT8P26-201ENST00000534154 1276 ntBASIC18.99■□□□□ 0.63
POLR3BQ9NW08 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 AC111152.3-201ENST00000569699 673 ntBASIC18.99■□□□□ 0.63
POLR3BQ9NW08 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 KRT8P10-201ENST00000450021 1447 ntBASIC18.99■□□□□ 0.63
POLR3BQ9NW08 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR3BQ9NW08 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 CROCCP3-202ENST00000420820 1947 ntBASIC18.98■□□□□ 0.63
POLR3BQ9NW08 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 TSPY22P-201ENST00000427496 604 ntBASIC18.98■□□□□ 0.63
POLR3BQ9NW08 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AL136038.4-201ENST00000603606 1261 ntBASIC18.98■□□□□ 0.63
POLR3BQ9NW08 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 AC112497.1-201ENST00000624824 639 ntBASIC18.98■□□□□ 0.63
POLR3BQ9NW08 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3BQ9NW08 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 AC004870.1-201ENST00000315132 882 ntBASIC18.97■□□□□ 0.63
POLR3BQ9NW08 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 AP000867.3-201ENST00000524675 377 ntBASIC18.97■□□□□ 0.63
POLR3BQ9NW08 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR3BQ9NW08 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms