Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 ECEL1P2-202ENST00000465689 757 ntBASIC18.42■□□□□ 0.54
TREX1Q9NSU2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 MIR3180-4-201ENST00000582223 153 ntBASIC18.42■□□□□ 0.54
TREX1Q9NSU2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.42■□□□□ 0.54
TREX1Q9NSU2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 AC018470.1-201ENST00000624790 3129 ntBASIC18.41■□□□□ 0.54
TREX1Q9NSU2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 PHGDH-209ENST00000641074 1780 ntBASIC18.41■□□□□ 0.54
TREX1Q9NSU2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 AL133373.2-201ENST00000623187 2828 ntBASIC18.41■□□□□ 0.54
TREX1Q9NSU2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.41■□□□□ 0.54
TREX1Q9NSU2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 HMGA1P5-201ENST00000412453 271 ntBASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TREX1Q9NSU2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms