Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC010331.1-201ENST00000611423 582 ntBASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
PRDM9Q9NQV7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PRDM9Q9NQV7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.45■□□□□ 0.38
PRDM9Q9NQV7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 FAM8A6P-201ENST00000407496 1135 ntBASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 SEC1P-202ENST00000473944 940 ntBASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 AC034232.1-201ENST00000506026 1064 ntBASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRDM9Q9NQV7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 AL163051.1-201ENST00000569214 1512 ntBASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.43■□□□□ 0.38
PRDM9Q9NQV7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms