Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
VTA1Q9NP79 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.65■□□□□ 0.9
VTA1Q9NP79 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
VTA1Q9NP79 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VTA1Q9NP79 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
VTA1Q9NP79 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VTA1Q9NP79 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
VTA1Q9NP79 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.64■□□□□ 0.9
VTA1Q9NP79 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.64■□□□□ 0.9
VTA1Q9NP79 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VTA1Q9NP79 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
VTA1Q9NP79 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.64■□□□□ 0.89
VTA1Q9NP79 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VTA1Q9NP79 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 BNIP3P18-201ENST00000593976 575 ntBASIC20.63■□□□□ 0.89
VTA1Q9NP79 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
VTA1Q9NP79 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VTA1Q9NP79 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 MRPL3P1-201ENST00000400109 1033 ntBASIC20.62■□□□□ 0.89
VTA1Q9NP79 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VTA1Q9NP79 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
VTA1Q9NP79 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AC112777.1-201ENST00000540175 1423 ntBASIC20.61■□□□□ 0.89
VTA1Q9NP79 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VTA1Q9NP79 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.61■□□□□ 0.89
VTA1Q9NP79 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms