Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 AF201337.1-201ENST00000520239 748 ntBASIC16.81■□□□□ 0.28
HMG20AQ9NP66 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 AL050303.2-201ENST00000619798 666 ntBASIC16.81■□□□□ 0.28
HMG20AQ9NP66 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HMG20AQ9NP66 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 AC105036.2-201ENST00000569468 176 ntBASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMG20AQ9NP66 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 ZNF815P-204ENST00000434898 1737 ntBASIC16.79■□□□□ 0.28
HMG20AQ9NP66 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 RAP2CP1-201ENST00000605103 478 ntBASIC16.79■□□□□ 0.28
HMG20AQ9NP66 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMG20AQ9NP66 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMG20AQ9NP66 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms