Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 GPR32P1-201ENST00000601788 811 ntBASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 AC016734.2-201ENST00000624325 1377 ntBASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CSNK1G1Q9HCP0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.27■□□□□ 0.67
CSNK1G1Q9HCP0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 TSPY22P-201ENST00000427496 604 ntBASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 AL121672.3-201ENST00000608644 468 ntBASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 AC087289.5-201ENST00000586076 3175 ntBASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 WIZP1-201ENST00000531444 2299 ntBASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CSNK1G1Q9HCP0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 ATP5G2P1-201ENST00000433580 426 ntBASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 BX276092.5-203ENST00000456199 560 ntBASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CSNK1G1Q9HCP0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 NPAP1P7-201ENST00000613027 823 ntBASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CSNK1G1Q9HCP0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms