Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDH9Q9HC56 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 CA15P1-201ENST00000481698 905 ntBASIC19.09■□□□□ 0.65
PCDH9Q9HC56 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH9Q9HC56 KRT8P9-201ENST00000558927 1449 ntBASIC19.08■□□□□ 0.65
PCDH9Q9HC56 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDH9Q9HC56 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH9Q9HC56 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH9Q9HC56 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH9Q9HC56 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 C2orf69P3-201ENST00000565542 1120 ntBASIC19.08■□□□□ 0.64
PCDH9Q9HC56 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH9Q9HC56 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.07■□□□□ 0.64
PCDH9Q9HC56 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.07■□□□□ 0.64
PCDH9Q9HC56 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH9Q9HC56 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms