Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 PRSS44-201ENST00000515154 1146 ntBASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 MTDHP1-201ENST00000605323 784 ntBASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP3-1Q9BYR8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 AC004980.1-204ENST00000429707 299 ntBASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 AC091390.4-202ENST00000476426 537 ntBASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 AL445675.2-201ENST00000620291 557 ntBASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP3-1Q9BYR8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
KRTAP3-1Q9BYR8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms