Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALPK3Q96L96 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALPK3Q96L96 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.08■□□□□ 0.81
ALPK3Q96L96 Z98044.1-201ENST00000632503 1764 ntBASIC20.08■□□□□ 0.81
ALPK3Q96L96 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALPK3Q96L96 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
ALPK3Q96L96 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALPK3Q96L96 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALPK3Q96L96 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALPK3Q96L96 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALPK3Q96L96 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ALPK3Q96L96 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 TSEN15P1-201ENST00000423257 515 ntBASIC20.08■□□□□ 0.8
ALPK3Q96L96 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.08■□□□□ 0.8
ALPK3Q96L96 AL096865.1-201ENST00000606796 927 ntBASIC20.08■□□□□ 0.8
ALPK3Q96L96 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALPK3Q96L96 Z82202.1-201ENST00000623446 1880 ntBASIC20.07■□□□□ 0.8
ALPK3Q96L96 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALPK3Q96L96 KRT8P32-201ENST00000512863 1461 ntBASIC20.07■□□□□ 0.8
ALPK3Q96L96 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALPK3Q96L96 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALPK3Q96L96 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALPK3Q96L96 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ALPK3Q96L96 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 AC106028.4-201ENST00000614509 607 ntBASIC20.07■□□□□ 0.8
ALPK3Q96L96 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ALPK3Q96L96 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 AC018845.2-201ENST00000568326 409 ntBASIC20.06■□□□□ 0.8
ALPK3Q96L96 AC005829.1-201ENST00000570002 483 ntBASIC20.06■□□□□ 0.8
ALPK3Q96L96 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.06■□□□□ 0.8
ALPK3Q96L96 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.06■□□□□ 0.8
ALPK3Q96L96 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.06■□□□□ 0.8
ALPK3Q96L96 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.06■□□□□ 0.8
ALPK3Q96L96 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.06■□□□□ 0.8
ALPK3Q96L96 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.06■□□□□ 0.8
ALPK3Q96L96 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 NKAPP1-205ENST00000585790 367 ntBASIC20.06■□□□□ 0.8
ALPK3Q96L96 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALPK3Q96L96 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 AC073621.1-201ENST00000392730 636 ntBASIC20.05■□□□□ 0.8
ALPK3Q96L96 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 LAGE3P1-201ENST00000425356 484 ntBASIC20.05■□□□□ 0.8
ALPK3Q96L96 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ALPK3Q96L96 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALPK3Q96L96 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.04■□□□□ 0.8
ALPK3Q96L96 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 AC093512.1-201ENST00000617969 520 ntBASIC20.04■□□□□ 0.8
ALPK3Q96L96 AC092865.6-201ENST00000642101 219 ntBASIC20.04■□□□□ 0.8
ALPK3Q96L96 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALPK3Q96L96 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.04■□□□□ 0.8
ALPK3Q96L96 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms