Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 AC011676.5-201ENST00000624864 2660 ntBASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 AC083906.2-201ENST00000511578 360 ntBASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP6Q96FZ7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 YBX1P10-201ENST00000444752 975 ntBASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.6■□□□□ 0.57
CHMP6Q96FZ7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHMP6Q96FZ7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms