Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AC138028.4-201ENST00000564984 1845 ntBASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AC112777.1-201ENST00000540175 1423 ntBASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC47A1Q96FL8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 SLC25A6P5-201ENST00000435663 894 ntBASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC47A1Q96FL8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 KRT8P41-201ENST00000533985 1514 ntBASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 AC133681.1-201ENST00000465482 601 ntBASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 RN7SL471P-201ENST00000580476 299 ntBASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 AC139713.2-201ENST00000641328 2723 ntBASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC47A1Q96FL8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC47A1Q96FL8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms