Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF31Q96EP0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 HBZP1-201ENST00000354915 429 ntBASIC17.81■□□□□ 0.44
RNF31Q96EP0 AL136038.3-201ENST00000561909 1096 ntBASIC17.81■□□□□ 0.44
RNF31Q96EP0 MIR3180-5-201ENST00000583743 153 ntBASIC17.81■□□□□ 0.44
RNF31Q96EP0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF31Q96EP0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF31Q96EP0 AL049812.1-201ENST00000432563 2267 ntBASIC17.81■□□□□ 0.44
RNF31Q96EP0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 AC093484.2-201ENST00000580996 2166 ntBASIC17.8■□□□□ 0.44
RNF31Q96EP0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 AL645929.1-201ENST00000420084 975 ntBASIC17.8■□□□□ 0.44
RNF31Q96EP0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
RNF31Q96EP0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF31Q96EP0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 SEC1P-202ENST00000473944 940 ntBASIC17.79■□□□□ 0.44
RNF31Q96EP0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 KRT126P-201ENST00000549467 1181 ntBASIC17.79■□□□□ 0.44
RNF31Q96EP0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF31Q96EP0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF31Q96EP0 AL032819.2-201ENST00000624543 2162 ntBASIC17.79■□□□□ 0.44
RNF31Q96EP0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF31Q96EP0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF31Q96EP0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms