Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 TMPOP1-202ENST00000424642 1267 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 PVRIG2P-201ENST00000435460 978 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC104076.2-201ENST00000448912 469 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC034232.1-201ENST00000506026 1064 ntBASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.12■□□□□ 0.33
CTHRC1Q96CG8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 AC135776.1-201ENST00000319817 2481 ntBASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 TSPY5P-201ENST00000426936 936 ntBASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 RASA4DP-201ENST00000460726 1199 ntBASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CTHRC1Q96CG8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 AL354751.1-201ENST00000412768 1863 ntBASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 AL024508.2-201ENST00000607749 1894 ntBASIC17.1■□□□□ 0.33
CTHRC1Q96CG8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 RNF165-205ENST00000588679 2904 ntBASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 AK4P3-201ENST00000418260 669 ntBASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 SPDYE15P-201ENST00000424157 909 ntBASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 HOMER2P1-201ENST00000455653 964 ntBASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 LINC01126-201ENST00000623515 1646 ntBASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTHRC1Q96CG8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms