Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 AC007967.2-201ENST00000432613 625 ntBASIC20■□□□□ 0.79
TRIM43Q96BQ3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM43Q96BQ3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 AC023274.1-201ENST00000418278 595 ntBASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 RNA5SP416-201ENST00000516838 111 ntBASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 AP002414.3-201ENST00000589352 1468 ntBASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM43Q96BQ3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 KRT18P28-201ENST00000453838 1332 ntBASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRIM43Q96BQ3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 AC105339.3-201ENST00000560043 636 ntBASIC19.96■□□□□ 0.79
TRIM43Q96BQ3 AC002347.1-201ENST00000569543 541 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms