Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF25Q96BH1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF25Q96BH1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF25Q96BH1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 AC008556.1-201ENST00000610908 2040 ntBASIC19.44■□□□□ 0.7
RNF25Q96BH1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 NUDT16P1-203ENST00000513809 620 ntBASIC19.44■□□□□ 0.7
RNF25Q96BH1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 AC113410.3-201ENST00000623366 203 ntBASIC19.44■□□□□ 0.7
RNF25Q96BH1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF25Q96BH1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF25Q96BH1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.43■□□□□ 0.7
RNF25Q96BH1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 AC116562.2-201ENST00000507042 360 ntBASIC19.43■□□□□ 0.7
RNF25Q96BH1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF25Q96BH1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 AC112777.1-201ENST00000540175 1423 ntBASIC19.42■□□□□ 0.7
RNF25Q96BH1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 AC020916.1-201ENST00000587762 1774 ntBASIC19.42■□□□□ 0.7
RNF25Q96BH1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.42■□□□□ 0.7
RNF25Q96BH1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF25Q96BH1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF25Q96BH1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RNF25Q96BH1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF25Q96BH1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 AC097488.1-201ENST00000507834 756 ntBASIC19.41■□□□□ 0.7
RNF25Q96BH1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF25Q96BH1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms