Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 AC092910.1-201ENST00000482027 1129 ntBASIC18.4■□□□□ 0.54
CLDN23Q96B33 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 HEIH-201ENST00000623091 1652 ntBASIC18.4■□□□□ 0.54
CLDN23Q96B33 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN23Q96B33 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN23Q96B33 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.39■□□□□ 0.54
CLDN23Q96B33 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.39■□□□□ 0.54
CLDN23Q96B33 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AL356309.3-201ENST00000624132 1934 ntBASIC18.39■□□□□ 0.53
CLDN23Q96B33 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 MIR149-201ENST00000384879 89 ntBASIC18.39■□□□□ 0.53
CLDN23Q96B33 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AC008735.5-201ENST00000623544 497 ntBASIC18.39■□□□□ 0.53
CLDN23Q96B33 AC022898.2-201ENST00000616822 1312 ntBASIC18.39■□□□□ 0.53
CLDN23Q96B33 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN23Q96B33 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 AC125634.1-201ENST00000438758 1403 ntBASIC18.39■□□□□ 0.53
CLDN23Q96B33 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN23Q96B33 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC141586.3-201ENST00000562166 1838 ntBASIC18.38■□□□□ 0.53
CLDN23Q96B33 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC004967.1-201ENST00000453589 447 ntBASIC18.38■□□□□ 0.53
CLDN23Q96B33 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC025062.2-201ENST00000605477 670 ntBASIC18.38■□□□□ 0.53
CLDN23Q96B33 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC009154.2-201ENST00000621177 724 ntBASIC18.38■□□□□ 0.53
CLDN23Q96B33 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN23Q96B33 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN23Q96B33 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CLDN23Q96B33 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN23Q96B33 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN23Q96B33 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms