Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.47■□□□□ 0.87
HPS3Q969F9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HPS3Q969F9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.47■□□□□ 0.87
HPS3Q969F9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS3Q969F9 AC133561.5-201ENST00000635547 218 ntBASIC20.47■□□□□ 0.87
HPS3Q969F9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS3Q969F9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS3Q969F9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
HPS3Q969F9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.47■□□□□ 0.87
HPS3Q969F9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HPS3Q969F9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.47■□□□□ 0.87
HPS3Q969F9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HPS3Q969F9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
HPS3Q969F9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS3Q969F9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS3Q969F9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.46■□□□□ 0.87
HPS3Q969F9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS3Q969F9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.46■□□□□ 0.87
HPS3Q969F9 AC145285.6-201ENST00000604632 637 ntBASIC20.46■□□□□ 0.87
HPS3Q969F9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.46■□□□□ 0.87
HPS3Q969F9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPS3Q969F9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HPS3Q969F9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.46■□□□□ 0.87
HPS3Q969F9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
HPS3Q969F9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.45■□□□□ 0.86
HPS3Q969F9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.45■□□□□ 0.86
HPS3Q969F9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HPS3Q969F9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.45■□□□□ 0.86
HPS3Q969F9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
HPS3Q969F9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPS3Q969F9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HPS3Q969F9 HOXB1-202ENST00000577092 1414 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 SDHAP2-201ENST00000455183 2001 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 AL163051.1-201ENST00000569214 1512 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HPS3Q969F9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.44■□□□□ 0.86
HPS3Q969F9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HPS3Q969F9 HMGA1P5-201ENST00000412453 271 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 AC010203.1-204ENST00000548782 407 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.44■□□□□ 0.86
HPS3Q969F9 AC024243.1-201ENST00000609234 778 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 AC073912.3-201ENST00000624414 853 ntBASIC20.44■□□□□ 0.86
HPS3Q969F9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS3Q969F9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HPS3Q969F9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS3Q969F9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPS3Q969F9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.44■□□□□ 0.86
HPS3Q969F9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms