Protein–RNA interactions for Protein: Q92629

SGCD, Delta-sarcoglycan, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCDQ92629 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SGCDQ92629 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.9■□□□□ 0.3
SGCDQ92629 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.9■□□□□ 0.3
SGCDQ92629 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.9■□□□□ 0.3
SGCDQ92629 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.9■□□□□ 0.3
SGCDQ92629 AC093787.1-201ENST00000450396 207 ntBASIC16.9■□□□□ 0.3
SGCDQ92629 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.9■□□□□ 0.3
SGCDQ92629 AC069236.1-201ENST00000604339 616 ntBASIC16.9■□□□□ 0.3
SGCDQ92629 AC005181.1-201ENST00000604782 1256 ntBASIC16.9■□□□□ 0.3
SGCDQ92629 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.9■□□□□ 0.3
SGCDQ92629 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SGCDQ92629 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SGCDQ92629 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SGCDQ92629 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SGCDQ92629 AP001094.4-201ENST00000579008 2176 ntBASIC16.89■□□□□ 0.3
SGCDQ92629 PKD1P1-201ENST00000458669 6805 ntBASIC16.89■□□□□ 0.29
SGCDQ92629 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SGCDQ92629 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.89■□□□□ 0.29
SGCDQ92629 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.89■□□□□ 0.29
SGCDQ92629 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.89■□□□□ 0.29
SGCDQ92629 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
SGCDQ92629 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.89■□□□□ 0.29
SGCDQ92629 AC008556.1-201ENST00000610908 2040 ntBASIC16.89■□□□□ 0.29
SGCDQ92629 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SGCDQ92629 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.88■□□□□ 0.29
SGCDQ92629 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.88■□□□□ 0.29
SGCDQ92629 AC068587.9-201ENST00000641814 219 ntBASIC16.88■□□□□ 0.29
SGCDQ92629 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 AC046158.3-201ENST00000624947 2558 ntBASIC16.88■□□□□ 0.29
SGCDQ92629 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SGCDQ92629 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SGCDQ92629 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SGCDQ92629 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SGCDQ92629 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SGCDQ92629 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms