Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 AL137784.2-201ENST00000607332 1000 ntBASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 IKBKGP1-201ENST00000612193 1073 ntBASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 AC011676.5-201ENST00000624864 2660 ntBASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 AC120498.8-201ENST00000614275 531 ntBASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CKAP2Q8WWK9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CKAP2Q8WWK9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 HTR7P1-201ENST00000538670 1336 ntBASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 LINC00602-201ENST00000629776 2065 ntBASIC18.34■□□□□ 0.53
CKAP2Q8WWK9 BCL2-203ENST00000589955 5011 ntBASIC18.33■□□□□ 0.53
CKAP2Q8WWK9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CKAP2Q8WWK9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms