Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHKBP1Q8TBC3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.39■□□□□ 0.7
SHKBP1Q8TBC3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.39■□□□□ 0.7
SHKBP1Q8TBC3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHKBP1Q8TBC3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHKBP1Q8TBC3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 PVRIG2P-201ENST00000435460 978 ntBASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 Z83836.1-201ENST00000624605 1642 ntBASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 AC068587.9-201ENST00000641814 219 ntBASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHKBP1Q8TBC3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 UNC93B7-201ENST00000509439 705 ntBASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 TPSP2-201ENST00000561760 610 ntBASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 RN7SL510P-201ENST00000581311 263 ntBASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 LETM1P2-201ENST00000597330 2178 ntBASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHKBP1Q8TBC3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.36■□□□□ 0.69
SHKBP1Q8TBC3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHKBP1Q8TBC3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms