Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AL591684.3-201ENST00000605187 298 ntBASIC14.36□□□□□ -0.11
LINC01006Q8NI28 BX640515.1-201ENST00000617215 977 ntBASIC14.36□□□□□ -0.11
LINC01006Q8NI28 AC023511.2-201ENST00000618803 211 ntBASIC14.36□□□□□ -0.11
LINC01006Q8NI28 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01006Q8NI28 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AL590627.1-203ENST00000421194 1026 ntBASIC14.35□□□□□ -0.11
LINC01006Q8NI28 TSPY12P-201ENST00000421279 868 ntBASIC14.35□□□□□ -0.11
LINC01006Q8NI28 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 MIR5100-201ENST00000579544 119 ntBASIC14.35□□□□□ -0.11
LINC01006Q8NI28 BNIP3P18-201ENST00000593976 575 ntBASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AC120114.3-201ENST00000611923 658 ntBASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.35□□□□□ -0.11
LINC01006Q8NI28 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01006Q8NI28 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 AC093484.2-201ENST00000580996 2166 ntBASIC14.34□□□□□ -0.11
LINC01006Q8NI28 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 MIR149-201ENST00000384879 89 ntBASIC14.34□□□□□ -0.11
LINC01006Q8NI28 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 GPALPP1-207ENST00000611650 899 ntBASIC14.34□□□□□ -0.11
LINC01006Q8NI28 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 TP73-AS1-207ENST00000624167 988 ntBASIC14.34□□□□□ -0.11
LINC01006Q8NI28 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 AC007952.6-201ENST00000573168 2673 ntBASIC14.34□□□□□ -0.11
LINC01006Q8NI28 AC003957.1-201ENST00000625108 2673 ntBASIC14.34□□□□□ -0.11
LINC01006Q8NI28 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01006Q8NI28 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC01006Q8NI28 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC01006Q8NI28 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms