Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIMC1Q8NDZ2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 AC012306.2-201ENST00000609350 630 ntBASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIMC1Q8NDZ2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.39■□□□□ 0.38
SIMC1Q8NDZ2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SIMC1Q8NDZ2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SIMC1Q8NDZ2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SIMC1Q8NDZ2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.39■□□□□ 0.38
SIMC1Q8NDZ2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 MIR564-202ENST00000385049 94 ntBASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 KRT18P21-201ENST00000515767 1272 ntBASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 AC145285.6-201ENST00000604632 637 ntBASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIMC1Q8NDZ2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIMC1Q8NDZ2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms