Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF248Q8NDW4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 AC020763.4-201ENST00000623414 4170 ntBASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF248Q8NDW4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF248Q8NDW4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 LINC00167-201ENST00000530583 1419 ntBASIC17.64■□□□□ 0.41
ZNF248Q8NDW4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 TREX1-205ENST00000625293 1783 ntBASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AF228730.7-201ENST00000641842 219 ntBASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AC233702.3-201ENST00000578656 1387 ntBASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 AC104417.2-201ENST00000562989 1793 ntBASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF248Q8NDW4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZNF248Q8NDW4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms