Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 RPS2P28-201ENST00000314255 741 ntBASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 MIR149-201ENST00000384879 89 ntBASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 AC010327.4-202ENST00000591484 748 ntBASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
LINC00116Q8NCU8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
LINC00116Q8NCU8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
LINC00116Q8NCU8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LINC00116Q8NCU8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
LINC00116Q8NCU8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
LINC00116Q8NCU8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 MED15P5-201ENST00000423150 992 ntBASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 AC098831.1-202ENST00000438821 336 ntBASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 AC009533.2-201ENST00000543664 586 ntBASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 AC011467.2-201ENST00000598425 242 ntBASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.32■■□□□ 1.32
LINC00116Q8NCU8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 UPF3AP3-201ENST00000420996 769 ntBASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 AC092910.1-201ENST00000482027 1129 ntBASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 FAM197Y3-203ENST00000618346 717 ntBASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.31■■□□□ 1.32
LINC00116Q8NCU8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 RPSAP43-201ENST00000402237 625 ntBASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
LINC00116Q8NCU8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LINC00116Q8NCU8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LINC00116Q8NCU8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms