Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 AC009947.2-201ENST00000444014 672 ntBASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM35BQ8NCS4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 AC104390.1-201ENST00000555663 520 ntBASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM35BQ8NCS4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 AC009065.1-201ENST00000564055 1225 ntBASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 NEK4P2-201ENST00000580004 1012 ntBASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 AC133561.5-201ENST00000635547 218 ntBASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM35BQ8NCS4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TMEM35BQ8NCS4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms