Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 AP003041.3-201ENST00000527151 707 ntBASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 AL353719.1-201ENST00000566847 864 ntBASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 AL096828.2-201ENST00000567259 1965 ntBASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 PHGDH-209ENST00000641074 1780 ntBASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.02■□□□□ 0.96
LINC00301Q8NCQ3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.02■□□□□ 0.95
LINC00301Q8NCQ3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 SLC25A1P2-201ENST00000430693 912 ntBASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 AC008550.1-201ENST00000511500 884 ntBASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 HOXB1-202ENST00000577092 1414 ntBASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00301Q8NCQ3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 UNC93B2-201ENST00000285383 730 ntBASIC21■□□□□ 0.95
LINC00301Q8NCQ3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 TSPY7P-201ENST00000431358 1114 ntBASIC21■□□□□ 0.95
LINC00301Q8NCQ3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00301Q8NCQ3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 AC092338.2-201ENST00000568827 1415 ntBASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 SLC25A6P5-201ENST00000435663 894 ntBASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 CR769767.2-201ENST00000622735 460 ntBASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00301Q8NCQ3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms