Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 AL032819.2-201ENST00000624543 2162 ntBASIC20.01■□□□□ 0.79
VPS52Q8N1B4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 KRT8P26-201ENST00000534154 1276 ntBASIC20.01■□□□□ 0.79
VPS52Q8N1B4 MIR3917-201ENST00000580971 93 ntBASIC20.01■□□□□ 0.79
VPS52Q8N1B4 AL136038.4-201ENST00000603606 1261 ntBASIC20.01■□□□□ 0.79
VPS52Q8N1B4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
VPS52Q8N1B4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VPS52Q8N1B4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VPS52Q8N1B4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20■□□□□ 0.79
VPS52Q8N1B4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20■□□□□ 0.79
VPS52Q8N1B4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20■□□□□ 0.79
VPS52Q8N1B4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20■□□□□ 0.79
VPS52Q8N1B4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20■□□□□ 0.79
VPS52Q8N1B4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20■□□□□ 0.79
VPS52Q8N1B4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20■□□□□ 0.79
VPS52Q8N1B4 RN7SL510P-201ENST00000581311 263 ntBASIC20■□□□□ 0.79
VPS52Q8N1B4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VPS52Q8N1B4 AP002414.4-201ENST00000589764 1148 ntBASIC20■□□□□ 0.79
VPS52Q8N1B4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VPS52Q8N1B4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20■□□□□ 0.79
VPS52Q8N1B4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20■□□□□ 0.79
VPS52Q8N1B4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20■□□□□ 0.79
VPS52Q8N1B4 AL391807.1-203ENST00000604392 2365 ntBASIC20■□□□□ 0.79
VPS52Q8N1B4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 AC004408.2-201ENST00000623613 2777 ntBASIC20■□□□□ 0.79
VPS52Q8N1B4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20■□□□□ 0.79
VPS52Q8N1B4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 AC093525.10-201ENST00000625130 1569 ntBASIC19.99■□□□□ 0.79
VPS52Q8N1B4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.99■□□□□ 0.79
VPS52Q8N1B4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 MIR662-201ENST00000384847 95 ntBASIC19.98■□□□□ 0.79
VPS52Q8N1B4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
VPS52Q8N1B4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms