Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 AC009102.3-201ENST00000623118 1491 ntBASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRTM4Q86VH4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 AC005332.1-201ENST00000577698 1310 ntBASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 PCED1CP-201ENST00000419887 785 ntBASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 SPDYE13P-201ENST00000445314 798 ntBASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 AC091076.1-201ENST00000610741 619 ntBASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 AL358472.4-201ENST00000633140 710 ntBASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRRTM4Q86VH4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 AL645929.1-201ENST00000420084 975 ntBASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 AP000550.4-202ENST00000639755 178 ntBASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRTM4Q86VH4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM4Q86VH4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM4Q86VH4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM4Q86VH4 TNXA-203ENST00000507684 2038 ntBASIC18.08■□□□□ 0.49
LRRTM4Q86VH4 IER3-202ENST00000376377 1350 ntBASIC18.08■□□□□ 0.49
LRRTM4Q86VH4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRTM4Q86VH4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRTM4Q86VH4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms