Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 AL023875.1-201ENST00000640777 796 ntBASIC16.72■□□□□ 0.27
SHFQ7M4L6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.72■□□□□ 0.27
SHFQ7M4L6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SHFQ7M4L6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.71■□□□□ 0.27
SHFQ7M4L6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.71■□□□□ 0.27
SHFQ7M4L6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SHFQ7M4L6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
SHFQ7M4L6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SHFQ7M4L6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SHFQ7M4L6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 REXO1L9P-201ENST00000604264 2108 ntBASIC16.7■□□□□ 0.26
SHFQ7M4L6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 AC093677.2-201ENST00000600169 1863 ntBASIC16.7■□□□□ 0.26
SHFQ7M4L6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 AC131212.4-201ENST00000623606 975 ntBASIC16.7■□□□□ 0.26
SHFQ7M4L6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 AL357033.4-201ENST00000617703 1807 ntBASIC16.7■□□□□ 0.26
SHFQ7M4L6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.7■□□□□ 0.26
SHFQ7M4L6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SHFQ7M4L6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 OR6D1P-202ENST00000641007 5290 ntBASIC16.69■□□□□ 0.26
SHFQ7M4L6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.69■□□□□ 0.26
SHFQ7M4L6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SHFQ7M4L6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms