Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
C11orf88Q6PI97 AC099398.1-201ENST00000567919 2776 ntBASIC16.09■□□□□ 0.17
C11orf88Q6PI97 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 RPS2P4-201ENST00000476944 856 ntBASIC16.09■□□□□ 0.17
C11orf88Q6PI97 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 AC008403.3-201ENST00000598924 454 ntBASIC16.09■□□□□ 0.17
C11orf88Q6PI97 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 IRX1P1-201ENST00000438849 1838 ntBASIC16.09■□□□□ 0.17
C11orf88Q6PI97 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C11orf88Q6PI97 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.08■□□□□ 0.17
C11orf88Q6PI97 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms