Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.98□□□□□ -0.17
MRPL54Q6P161 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MRPL54Q6P161 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.98□□□□□ -0.17
MRPL54Q6P161 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 AC093677.2-201ENST00000600169 1863 ntBASIC13.97□□□□□ -0.17
MRPL54Q6P161 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MRPL54Q6P161 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MRPL54Q6P161 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 AL118508.1-201ENST00000613502 2345 ntBASIC13.96□□□□□ -0.17
MRPL54Q6P161 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 AF213884.3-201ENST00000563833 479 ntBASIC13.96□□□□□ -0.17
MRPL54Q6P161 TERF1P2-201ENST00000583350 1212 ntBASIC13.96□□□□□ -0.17
MRPL54Q6P161 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.96□□□□□ -0.17
MRPL54Q6P161 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MRPL54Q6P161 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MRPL54Q6P161 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
MRPL54Q6P161 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MRPL54Q6P161 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.96□□□□□ -0.18
MRPL54Q6P161 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms