Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.4■■□□□ 1.02
KRT40Q6A162 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.4■■□□□ 1.02
KRT40Q6A162 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.4■■□□□ 1.02
KRT40Q6A162 KRT126P-201ENST00000549467 1181 ntBASIC21.4■■□□□ 1.02
KRT40Q6A162 AC010653.2-201ENST00000623505 997 ntBASIC21.4■■□□□ 1.02
KRT40Q6A162 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.4■■□□□ 1.02
KRT40Q6A162 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
KRT40Q6A162 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT40Q6A162 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
KRT40Q6A162 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT40Q6A162 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KRT40Q6A162 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT40Q6A162 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.39■■□□□ 1.02
KRT40Q6A162 AL354751.1-201ENST00000412768 1863 ntBASIC21.39■■□□□ 1.02
KRT40Q6A162 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT40Q6A162 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
KRT40Q6A162 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT40Q6A162 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT40Q6A162 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
KRT40Q6A162 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
KRT40Q6A162 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.39■■□□□ 1.01
KRT40Q6A162 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT40Q6A162 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.39■■□□□ 1.01
KRT40Q6A162 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
KRT40Q6A162 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.39■■□□□ 1.01
KRT40Q6A162 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
KRT40Q6A162 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT40Q6A162 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT40Q6A162 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT40Q6A162 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
KRT40Q6A162 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT40Q6A162 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT40Q6A162 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
KRT40Q6A162 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT40Q6A162 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 AL390961.4-201ENST00000623958 2535 ntBASIC21.38■■□□□ 1.01
KRT40Q6A162 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
KRT40Q6A162 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.38■■□□□ 1.01
KRT40Q6A162 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT40Q6A162 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT40Q6A162 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
KRT40Q6A162 AC020763.4-201ENST00000623414 4170 ntBASIC21.37■■□□□ 1.01
KRT40Q6A162 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT40Q6A162 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
KRT40Q6A162 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT40Q6A162 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 AP000593.1-201ENST00000393668 712 ntBASIC21.37■■□□□ 1.01
KRT40Q6A162 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 AK4P3-201ENST00000418260 669 ntBASIC21.37■■□□□ 1.01
KRT40Q6A162 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.37■■□□□ 1.01
KRT40Q6A162 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
KRT40Q6A162 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
KRT40Q6A162 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT40Q6A162 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT40Q6A162 AC091076.1-201ENST00000610741 619 ntBASIC21.37■■□□□ 1.01
KRT40Q6A162 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
KRT40Q6A162 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
KRT40Q6A162 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
KRT40Q6A162 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT40Q6A162 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT40Q6A162 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT40Q6A162 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT40Q6A162 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms