Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.39■□□□□ 0.54
LDLRAP1Q5SW96 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LDLRAP1Q5SW96 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LDLRAP1Q5SW96 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 AC117947.1-201ENST00000427448 529 ntBASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 YBX1P2-201ENST00000489612 999 ntBASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 AC139887.4-201ENST00000607877 719 ntBASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 AL023973.1-201ENST00000624619 620 ntBASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.39■□□□□ 0.53
LDLRAP1Q5SW96 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 AK4P3-201ENST00000418260 669 ntBASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 AC104390.1-201ENST00000555663 520 ntBASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 AC024243.1-201ENST00000609234 778 ntBASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 AC006011.2-201ENST00000621313 1158 ntBASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDLRAP1Q5SW96 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 RNF152P1-201ENST00000397754 604 ntBASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 AC011558.1-201ENST00000623459 338 ntBASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LDLRAP1Q5SW96 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LDLRAP1Q5SW96 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms