Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RUNDC3AQ59EK9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 FLJ13224-201ENST00000313737 1514 ntBASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RUNDC3AQ59EK9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 HLA-L-209ENST00000420110 1011 ntBASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 KRT16P1-201ENST00000399124 1418 ntBASIC17.46■□□□□ 0.39
RUNDC3AQ59EK9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.46■□□□□ 0.38
RUNDC3AQ59EK9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 MIR564-202ENST00000385049 94 ntBASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 FAM207BP-201ENST00000447172 505 ntBASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 AC026271.3-201ENST00000571884 352 ntBASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 AC008622.2-201ENST00000617006 1229 ntBASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 AL031985.4-201ENST00000642138 673 ntBASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RUNDC3AQ59EK9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.44■□□□□ 0.38
RUNDC3AQ59EK9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms